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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953191.1_cds_XP_016492434.1_82648
CDS Infomation

[gene=LOC107811953] [db_xref=GeneID:107811953] [protein=4-alpha-glucanotransferase DPE2-like isoform X4] [protein_id=XP_016492434.1] [location=complement(join(150853..150864,170325..170423,170525..170684,170896..170993,171131..171250,172860..172931,173020..173094,173177..173302,173406..173648,173749..173832,173918..174019,174273..174392,179370..179408,179527..179556))] [gbkey=CDS]
Sequence

ATGTCAGAAAATATTCAAGAAGATATCAAGCAAGAGATCAGGGAGGCAAGAGTTCAGTTG
GATAAAAAGGATGTAGATTATGAGGCTGCCATGGCTACAAAACTTTCTATTGCCAAGAAA
ATTTTCGCTCGTGAGAAGGAGAGCATACTAAATTCAAAATCATTCCTGGAGTTCTTTTCT
GAAAATCAGGAATGGTTGAAACCCTATGCTGCTTTCTGTTTTCTGCGGGACTTCTTTGAA
ACATCTGACCGCAGCCAATGGGGCCGGTTTTCTGAATTTTCAAAAGAGAAGCTTGAGAAA
CTCGTCTCAAAAGAAAGCTTGCATTATGAAGTTATTAGTTTTCATTACTACATCCAGTTC
CATTTGCATCTACAATTATCAGAAGCTGCGGAATATGCACGAAAGAAAGGTGTAGTGCTG
AAAGGTGACCTGCCCATTGGTGTTGATAGGAATAGTGTGGATACCTGGGTCTACCCAAAT
TTGTTTCGCATGAACACCTCAACTGGGGCACCCCCTGACTATTTTGATAAAAATGGCCAG
AATTGGGGATTCCCCACTTATAATTGGGAAGAAATGTCAAAAGATAACTATGGGTGGTGG
CGTGCTCGTCTAACACAGATGGGAAAGTACTTTACAGCTTATAGGATTGATCACATATTG
GGATTCTTCAGAATATGGGAGCTTCCAGATCATGCAATGACTGGTCTTTGTGGAAAATTT
CGACCTTCTATTCCTATTAGTCAGGAAGAGCTCGAGTCAGAAGGATTATGGGACTTCAAC
CATCTGACCCAGCCTTATATTGGACAAGAGCTTTTACAGGAAAAATTTGGAGCTTCTTGG
ACAATAATAGCTTCTACCTTTTTGAATGAATATCAGAAGGGCTTTTATGAGTTCAAGGAG
GAATGCAATACTGAGAAGAAAATTGCATCTGTGTTGAAGTCATTCTTGGAAACATCCATG
TTGGTAAAGAGTGAAGAGAAGCTACGACGAAAACTCTTTGATCTTCTGCAGAATGTAGCT
CTAATTAAGGATCCAGAAGATCTGAGAAAGTTTTACCCTCGCTTCAATATTGAAGACACG
ACAAGCTTCAAGGATTTGGATCAGCACAGTCAAAATGTCCTAAAAAGATTGTACTACGAT
TACTACTTCCAGCGACAAGAAGGTCTTTGGCGTCAAAATGCTTTGAAAACTCTGCCTGTT
CTTTTGAACTCATCAAATATGCTCGCTTGTGGGGAAGACCTTGGCCTAATTCCCTCCTGT
GTTCATCCTGTGATGCAAGAATTGGGCTTAGTAGGCTTACGCATTCAACGCATGCCAAGT
GAACCTGGTCTAGAATTTGGTATTCCTTCTCAGTACAGCTACATGACGGTGTACATGTGA

Peptide Sequence

PEP ID

XP_016492434.1
PEP Infomation

PREDICTED: 4-alpha-glucanotransferase DPE2-like isoform X4 [Nicotiana tabacum]
Sequence

MSENIQEDIKQEIREARVQLDKKDVDYEAAMATKLSIAKKIFAREKESILNSKSFLEFFS
ENQEWLKPYAAFCFLRDFFETSDRSQWGRFSEFSKEKLEKLVSKESLHYEVISFHYYIQF
HLHLQLSEAAEYARKKGVVLKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQ
NWGFPTYNWEEMSKDNYGWWRARLTQMGKYFTAYRIDHILGFFRIWELPDHAMTGLCGKF
RPSIPISQEELESEGLWDFNHLTQPYIGQELLQEKFGASWTIIASTFLNEYQKGFYEFKE
ECNTEKKIASVLKSFLETSMLVKSEEKLRRKLFDLLQNVALIKDPEDLRKFYPRFNIEDT
TSFKDLDQHSQNVLKRLYYDYYFQRQEGLWRQNALKTLPVLLNSSNMLACGEDLGLIPSC
VHPVMQELGLVGLRIQRMPSEPGLEFGIPSQYSYMTVYM

Transcript Sequence

Gene sequence data has not been registered.